CDS

Accession Number TCMCG006C77419
gbkey CDS
Protein Id XP_013697146.1
Location complement(join(9206520..9206712,9206803..9206951,9207025..9207124,9207218..9207324,9207414..9207914,9208018..9208269,9208358..9208760,9208836..9209035,9209176..9209346,9209439..9209741,9209815..9209872,9210022..9210101,9210191..9210274,9210365..9210442,9210593..9210676,9210762..9210827,9211017..9211089,9211179..9211357,9211451..9211513,9211841..9211906,9211981..9212100))
Gene LOC106401220
GeneID 106401220
Organism Brassica napus

Protein

Length 1109aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA293435
db_source XM_013841692.2
Definition valine--tRNA ligase, mitochondrial 1-like [Brassica napus]

EGGNOG-MAPPER Annotation

COG_category J
Description Belongs to the class-I aminoacyl-tRNA synthetase family
KEGG_TC -
KEGG_Module M00359        [VIEW IN KEGG]
M00360        [VIEW IN KEGG]
KEGG_Reaction R03665        [VIEW IN KEGG]
KEGG_rclass RC00055        [VIEW IN KEGG]
RC00523        [VIEW IN KEGG]
BRITE ko00000        [VIEW IN KEGG]
ko00001        [VIEW IN KEGG]
ko00002        [VIEW IN KEGG]
ko01000        [VIEW IN KEGG]
ko01007        [VIEW IN KEGG]
ko03016        [VIEW IN KEGG]
KEGG_ko ko:K01873        [VIEW IN KEGG]
EC 6.1.1.9        [VIEW IN KEGG]        [VIEW IN INGREDIENT]
KEGG_Pathway ko00970        [VIEW IN KEGG]
map00970        [VIEW IN KEGG]
GOs GO:0000003        [VIEW IN EMBL-EBI]
GO:0003006        [VIEW IN EMBL-EBI]
GO:0003674        [VIEW IN EMBL-EBI]
GO:0003824        [VIEW IN EMBL-EBI]
GO:0004812        [VIEW IN EMBL-EBI]
GO:0004832        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005737        [VIEW IN EMBL-EBI]
GO:0005739        [VIEW IN EMBL-EBI]
GO:0005829        [VIEW IN EMBL-EBI]
GO:0006082        [VIEW IN EMBL-EBI]
GO:0006139        [VIEW IN EMBL-EBI]
GO:0006399        [VIEW IN EMBL-EBI]
GO:0006412        [VIEW IN EMBL-EBI]
GO:0006418        [VIEW IN EMBL-EBI]
GO:0006438        [VIEW IN EMBL-EBI]
GO:0006518        [VIEW IN EMBL-EBI]
GO:0006520        [VIEW IN EMBL-EBI]
GO:0006725        [VIEW IN EMBL-EBI]
GO:0006807        [VIEW IN EMBL-EBI]
GO:0007275        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0009058        [VIEW IN EMBL-EBI]
GO:0009059        [VIEW IN EMBL-EBI]
GO:0009507        [VIEW IN EMBL-EBI]
GO:0009536        [VIEW IN EMBL-EBI]
GO:0009790        [VIEW IN EMBL-EBI]
GO:0009791        [VIEW IN EMBL-EBI]
GO:0009793        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0010154        [VIEW IN EMBL-EBI]
GO:0010467        [VIEW IN EMBL-EBI]
GO:0016070        [VIEW IN EMBL-EBI]
GO:0016874        [VIEW IN EMBL-EBI]
GO:0016875        [VIEW IN EMBL-EBI]
GO:0019538        [VIEW IN EMBL-EBI]
GO:0019752        [VIEW IN EMBL-EBI]
GO:0022414        [VIEW IN EMBL-EBI]
GO:0032501        [VIEW IN EMBL-EBI]
GO:0032502        [VIEW IN EMBL-EBI]
GO:0034641        [VIEW IN EMBL-EBI]
GO:0034645        [VIEW IN EMBL-EBI]
GO:0034660        [VIEW IN EMBL-EBI]
GO:0043038        [VIEW IN EMBL-EBI]
GO:0043039        [VIEW IN EMBL-EBI]
GO:0043043        [VIEW IN EMBL-EBI]
GO:0043170        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0043436        [VIEW IN EMBL-EBI]
GO:0043603        [VIEW IN EMBL-EBI]
GO:0043604        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044238        [VIEW IN EMBL-EBI]
GO:0044249        [VIEW IN EMBL-EBI]
GO:0044260        [VIEW IN EMBL-EBI]
GO:0044267        [VIEW IN EMBL-EBI]
GO:0044271        [VIEW IN EMBL-EBI]
GO:0044281        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044444        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0046483        [VIEW IN EMBL-EBI]
GO:0048316        [VIEW IN EMBL-EBI]
GO:0048608        [VIEW IN EMBL-EBI]
GO:0048731        [VIEW IN EMBL-EBI]
GO:0048856        [VIEW IN EMBL-EBI]
GO:0061458        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:0090304        [VIEW IN EMBL-EBI]
GO:0140098        [VIEW IN EMBL-EBI]
GO:0140101        [VIEW IN EMBL-EBI]
GO:1901360        [VIEW IN EMBL-EBI]
GO:1901564        [VIEW IN EMBL-EBI]
GO:1901566        [VIEW IN EMBL-EBI]
GO:1901576        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGTCACTGCTCTTCCTCAGAAGAGCCAAGCCGTTATTTACATCTCCTTCTCAGGCCAGCGTCGCATCTCCGAGGCTTACAAATCTACTACGTCGTTCGTTTCACGGTTCGAGAATAATGTCCGAAGCAGAGAAGAAGATCGTTACAGAGGAGGAGCTTGAGAGAAAGAAGAAGAAGGATGAGAAGGCTAGAGAAAAGGAGTTGAAGAAGCAAAAAGCTGCGGAGAAAGCAAAGCTTGCAGAACTCAAGGCAAAGCAGGCGAAAGATGGAACTACTGCCCCTAAAAAGAGCACAAAGAAGAGTTCCAAACGGGATGCAATCGAAGAGAATCCTGCGGATTTTGTGGACCCTGAAACTCCTCTTGGTGAGAGGAAAAGGCTCTCTTCACAGATGGCTAAACAGTACAGTCCTGCCGCCGTTGAGAAATCTTGGTATGCTTGGTGGGAGAGTTCTGACTTCTTTAAGGCGGATGCTAAGAGTTCCAAGCCACCGTTTGTTATTGTTCTTCCTCCTCCAAATGTGACTGGAGCCTTGCATATTGGCCATGCCCTGACATCTGCCATTGAGGATACGATTATTCGTTGGAAGAGAATGTCTGGTTATAATGCTCTGTGGGTGCCCGGGATGGACCATGCTGGTATAGCTACACAGGTTGTGGTTGAGAAAAAGCTCATGCGTGAAAGAGGATTGACTAGGCATGACGTTGGCCGTGAAGAATTCATAAATGAAGTGTGGAAGTGGAAGAACCAACATGGTAGCACGATTCTAACACAACTACGGCGTCTAGGAGCTTCTCTTGATTGGTCTCGTGAGTGTTTTACAATGGACGAGCAAAGATCAAAAGCTGTCACTGAGGGCTTTGTACGGTTATACAAGGAAGGGCTTATCTATAGGGATGTTCGACTTGTTAATTGGGACTGTGTTTTGAAAACAGCCGTATCTGACGTTGAGGTTGAGCATATCGATATCAAAGAAAAAACGCTATTAAAAGTTCCTGGCTATGAGAAGCCAGTAGAATTTGGTCTTCTTACTTCATTTGCTTACCCTCTGGAGGGAGGCTTGGGCGAGGTTGTCGTTGCCACTACTAGGGTGGAAACAATGCTTGGGGATACTGCCATTGCTATTCATCCTGATGATGTAAGATACACGCATCTTCATGGGAAATTCGCTGTGCACCCATTAAATGGACGGAAGTTACCAATTATCTGCGATGGAATACTCGTTGATCCAAACTTTGGTACTGGTTGTGTTAAGATCACTCCAGCCCATGACCCCAATGATTGTGAGGTCGGAAAGCGTCACAATCTTGAATTTATAAACATATTAACGGATGATGGAATGATCAACACAAACGGCGGTTCTGACTTCACAGGGATGCCACGCTTTGCAGCGCGTGAGGCAGTTGTTGAAGCTCTGAAGAATAAGGGGCTCTACCGAGGTGCCCAAAACAATGAAATGAGGCTTGGACTTTGCCAAAGAACCGGTGATGTCATTGAGCCTATGATTAAGCCTCAATGGTACGTCAATTGCAGCACGATTGCAAAGGAGGCTCTCGATGTTGCCATCACTGATGAAAACAAGAAGCTCGAGTTTATACCAAAGCAGTACACGGCAGAGTGGAGAAGATGGCTAGAGAACATACGTGACTGGTGTATTTCAAGACAGCTTTGGTGGGGCCACCGGATTCCAGCATGGTACGCAACACTAGAGGAAGATGAGCGCAAGGAGGTCGGTGCGTACAGTGACCATTGGGTTGTTGCAAGAACCGAGGAAGAAGCTCGAAAAGAGGCTGCTGAAAAGTTTTCTGGGAAGAAGTTTGAACTCACCCAAGATTTTGATGTGCTTGATACGTGGTTCTCTTCTGGGCTCTTTCCGTTATCTGTTCTGGGATGGCCTGATGAAACTGATGACTTCAAAGCCTTCTATCCGACATCTGTCCTAGAAACTGGGCATGATATTCTCTTTTTCTGGGTTGCTCGTATGGTTATGATGGGAATGAAACTAGGTGGTGACGTTCCATTCAGTAAGGTTTATTTGCATCCTATGATACGTGATGCACATGGGCGTAAGATGTCAAAATCTCTTGGAAACGTCATTGATCCGCTTGAAGTAATAAACGGGGTAACTCTTGATGGTCTTCACAAGAAATTAGAAGAGGGTAACTTGGATCCGAAAGAGCTGGTTGTTGCCAAAGAAGGACAAGTGAAGGACTTCCCAAATGGTATTTCCGAATGTGGTGCGGATGCTCTTCGGTTTGCACTCGTCTCTTACACTGCTCAGTCTGACAAAATAAACTTGGACATCCTCCGAGTGGTTGGTTACCGTCAATGGTGTAACAAGCTTTGGAACGCTGTCAGATTCGCGATGATGAGGCTTGGCGATGCTTATTCCCCTCCGCTGACTCTAATCCCCGAAACGATGCCATTCAGCTGCCAATGGATTCTCTCTGTACTAAATAAAGCAATATCAAAGACGGTGGATTCACTGAACGCATTTGAGTTCTCGGATGCAGCCAACACAGTATATGCATGGTGGCAATATCAGTTCTGTGATGTGTACATTGAAGCTATCAAGCCTTACTTTGCTGGTGACAATCCAGCGTTTGCTTCAGAGAGGGCTCATGCACAGCATGCTCTCTGGGTATCGTTGGAGACTGGCTTGAGACTGCTTCACCCTCTGATGCCTTTTGTTACTGAAGAGCTATGGCAACGTCTGCCTTCACCCAAAAACTCTGAAAGAAAAGCGTCTATCATGATATGTGATTACCCCTCTGCTATAGAGAATTGGACAAATGAAAAAGTGGAGACCGAAATGGAAACCGTTCTAGCGAGCGTGAAGTGCCTGAGAGCACTCCGTGCAGAGTTGCTAGAGAAACAGAAAAATGAAAGGTTACCGGCCTTTGCTCTGTGTGAAAACAACGTAACATCTGAAATTGTAAAATCTCACGAGTTAGATATTAGAACACTTGCAAATCTATCGTCGTTAGAGGTTCTGTTAAAAGGAGAACACGCAGCCCCATCTGGATCTGCAGTTGAGACAGTGAACGAGAACCTTAAGGTGTATCTCCAAGTGGCCAGAGCCATTAACACAGAAGCTGAGCAAGAAAAGATCAGAAACAAGATTGACGAACTACAAAAACAAAAGGAGAAGTTGCAGAAGATGATGAGTGTGTCTGGGTACGAAGAGAAGGTCCCTGCAAACATTAAAGAAGACAACGCCACAAAGCTCGCTAAGATTCTTCAAGAATTCGATTTCTTTGAAAATGAAAGTGCTCGTCTCGTTGCAGAGACAGAAACCTCTGGAAATCAACAAACTGAGCAGAAGAAGTGA
Protein:  
MSLLFLRRAKPLFTSPSQASVASPRLTNLLRRSFHGSRIMSEAEKKIVTEEELERKKKKDEKAREKELKKQKAAEKAKLAELKAKQAKDGTTAPKKSTKKSSKRDAIEENPADFVDPETPLGERKRLSSQMAKQYSPAAVEKSWYAWWESSDFFKADAKSSKPPFVIVLPPPNVTGALHIGHALTSAIEDTIIRWKRMSGYNALWVPGMDHAGIATQVVVEKKLMRERGLTRHDVGREEFINEVWKWKNQHGSTILTQLRRLGASLDWSRECFTMDEQRSKAVTEGFVRLYKEGLIYRDVRLVNWDCVLKTAVSDVEVEHIDIKEKTLLKVPGYEKPVEFGLLTSFAYPLEGGLGEVVVATTRVETMLGDTAIAIHPDDVRYTHLHGKFAVHPLNGRKLPIICDGILVDPNFGTGCVKITPAHDPNDCEVGKRHNLEFINILTDDGMINTNGGSDFTGMPRFAAREAVVEALKNKGLYRGAQNNEMRLGLCQRTGDVIEPMIKPQWYVNCSTIAKEALDVAITDENKKLEFIPKQYTAEWRRWLENIRDWCISRQLWWGHRIPAWYATLEEDERKEVGAYSDHWVVARTEEEARKEAAEKFSGKKFELTQDFDVLDTWFSSGLFPLSVLGWPDETDDFKAFYPTSVLETGHDILFFWVARMVMMGMKLGGDVPFSKVYLHPMIRDAHGRKMSKSLGNVIDPLEVINGVTLDGLHKKLEEGNLDPKELVVAKEGQVKDFPNGISECGADALRFALVSYTAQSDKINLDILRVVGYRQWCNKLWNAVRFAMMRLGDAYSPPLTLIPETMPFSCQWILSVLNKAISKTVDSLNAFEFSDAANTVYAWWQYQFCDVYIEAIKPYFAGDNPAFASERAHAQHALWVSLETGLRLLHPLMPFVTEELWQRLPSPKNSERKASIMICDYPSAIENWTNEKVETEMETVLASVKCLRALRAELLEKQKNERLPAFALCENNVTSEIVKSHELDIRTLANLSSLEVLLKGEHAAPSGSAVETVNENLKVYLQVARAINTEAEQEKIRNKIDELQKQKEKLQKMMSVSGYEEKVPANIKEDNATKLAKILQEFDFFENESARLVAETETSGNQQTEQKK